Variant: chr17-15961951-A-G

INDEX-db frequencies

INDEX ALL INDEX Male INDEX Female INDEX Controls
Allele Count 81 57 24 81
Allele Number 350 202 148 350
Allele Frequency 0.23143 0.28218 0.16216 0.23143
Number of Homozygotes 26 19 7 26

Gene: NCOR1

Region: intronic

Annotation: None

Consequence: None

Average Genotype Quality in variant carriers: 60.02

Average Depth at the site in variant carriers: 19.44

dbSNP ID: rs2157991

ClinVar: chr17-15961951-A-G

UCSC Browser: chr17-15961951-A-G

Browse the variant in INDEX-db genome browser


In silico functional predictions

Score Prediction
SIFT None None
Polyphen2 HDIV None None
Polyphen2 HVAR None None
Mutation Taster None None
Mutation Assessor None None
LRT None None
FATHMM None None
CADD Phred None .
CADD Raw None .

Exome Aggregation Consortium frequencies

Allele Frequency
ExAC ALL 0.5033
ExAC SAS 0.4277
ExAC AFR 0.5081
ExAC AMR 0.4027
ExAC EAS 0.2136
ExAC FIN 0.6049
ExAC NFE 0.5644
ExAC OTH 0.5509
1000 Genomes 0.432308