NCOR1 nuclear receptor corepressor 1

Ensembl gene ID: ENSG00000141027

UCSC Browser: chr17:15933407-16097953

GeneCards: NCOR1

gnomAD: NCOR1

PharmGKB ID: PA31477


ARCHS4: NCOR1

GTEx : NCOR1

Number of variants: 97

Browse the gene in INDEX-db genome browser

Variants

Variant ID Region Annotation Consequence dbSNP AC in INDEX_ALL AF in INDEX_ALL No. of Homozygotes AF in INDEX_Controls
chr17-15932820-G-C downstream None None rs9916868 17 0.04857 6 0.04857
chr17-15933118-C-A downstream None None rs11650682 5 0.01429 0 0.01429
chr17-15935183-G-T UTR3 None None rs534389826 1 0.00286 0 0.00286
chr17-15935456-C-T UTR3 None None rs73981417 7 0.02000 0 0.02000
chr17-15942832-C-T exonic nonsynonymous_SNV ['c.G6561A', 'p.M2187I'] rs139149781 2 0.00571 0 0.00571
chr17-15943648-T-C intronic None None . 2 0.00571 0 0.00571
chr17-15943910-T-C intronic None None rs1075901 70 0.20000 19 0.20000
chr17-15947744-C-G intronic None None rs561069968 2 0.00571 0 0.00571
chr17-15948322-A-G intronic None None rs7218152 1 0.00286 0 0.00286
chr17-15948430-A-G intronic None None rs4792717 1 0.00286 0 0.00286
chr17-15950198-G-A intronic None None rs1079533 49 0.14000 10 0.14000
chr17-15961336-C-T exonic nonsynonymous_SNV ['c.G5744A', 'p.R1915Q'] rs200722329 1 0.00286 0 0.00286
chr17-15961951-A-G intronic None None rs2157991 81 0.23143 26 0.23143
chr17-15961993-T-A intronic None None rs2157990 35 0.10000 12 0.10000
chr17-15965268-G-A intronic None None rs73981431 6 0.01714 0 0.01714
chr17-15967338-C-A intronic None None rs73981433 11 0.03143 1 0.03143
chr17-15968143-T-C intronic None None rs2285583 85 0.24286 15 0.24286
chr17-15971377-G-T exonic synonymous_SNV ['c.C4620A', 'p.T1540T'] rs576088669 3 0.00857 0 0.00857
chr17-15973844-A-T intronic None None rs12942295 108 0.30857 23 0.30857
chr17-15976696-T-C intronic None None rs117087658 5 0.01429 0 0.01429
chr17-15976868-C-T exonic nonsynonymous_SNV ['c.G3734A', 'p.R1245Q'] rs139458532 1 0.00286 0 0.00286
chr17-15976883-T-C exonic nonsynonymous_SNV ['c.A3719G', 'p.N1240S'] rs767592019 1 0.00286 0 0.00286
chr17-15977005-A-T intronic None None rs11078330 19 0.05429 5 0.05429
chr17-15983898-T-C intronic None None rs139446647 11 0.03143 0 0.03143
chr17-15990754-G-A intronic None None rs60011951 1 0.00286 0 0.00286
chr17-15994888-C-T UTR3 None None rs2078050 8 0.02286 3 0.02286
chr17-15995262-C-A exonic synonymous_SNV ['c.G2652T', 'p.R884R'] rs534096909 1 0.00286 0 0.00286
chr17-15995415-A-C intronic None None . 1 0.00286 0 0.00286
chr17-16004537-G-A intronic None None rs62073621 7 0.02000 1 0.02000
chr17-16004611-G-A exonic synonymous_SNV ['c.C2364T', 'p.A788A'] rs549743825 1 0.00286 0 0.00286
chr17-16005187-T-C intronic None None rs2285580 40 0.11429 13 0.11429
chr17-16011485-G-A intronic None None rs555246349 1 0.00286 0 0.00286
chr17-16012224-A-G exonic synonymous_SNV ['c.T1731C', 'p.T577T'] rs376830568 1 0.00286 0 0.00286
chr17-16022883-T-C intronic None None rs76010143 4 0.01143 0 0.01143
chr17-16041306-C-A intronic None None rs2324142 7 0.02000 3 0.02000
chr17-16041410-A-T intronic None None rs567116649 1 0.00286 0 0.00286
chr17-16041636-T-C intronic None None rs2875265 29 0.08286 9 0.08286
chr17-16046845-A-T intronic None None rs2285579 52 0.14857 15 0.14857
chr17-16046906-A-G intronic None None rs199713999 22 0.06286 2 0.06286
chr17-16049626-A-T intronic None None rs11078333 20 0.05714 6 0.05714
chr17-16055239-C-T intronic None None . 1 0.00286 0 0.00286
chr17-16068234-A-T intronic None None rs369130955 4 0.01143 0 0.01143
chr17-16068240-A-T intronic None None rs372814812 5 0.01429 0 0.01429
chr17-16068252-C-A intronic None None rs374864874 8 0.02286 0 0.02286
chr17-16068340-C-T exonic nonsynonymous_SNV ['c.G244A', 'p.E82K'] rs76780359 17 0.04857 0 0.04857
chr17-16068343-G-A exonic stopgain ['c.C241T', 'p.R81X'] rs78230791 19 0.05429 0 0.05429
chr17-16068362-C-T exonic synonymous_SNV ['c.G222A', 'p.Q74Q'] rs76375524 37 0.10571 0 0.10571
chr17-16068377-C-G exonic nonsynonymous_SNV ['c.G207C', 'p.K69N'] rs200020868 46 0.13143 0 0.13143
chr17-16068383-G-A exonic synonymous_SNV ['c.C201T', 'p.L67L'] rs199892481 51 0.14571 0 0.14571
chr17-16068396-G-A exonic nonsynonymous_SNV ['c.C188T', 'p.S63L'] rs150910818 65 0.18571 1 0.18571
chr17-16068463-C-T exonic nonsynonymous_SNV ['c.G121A', 'p.G41R'] rs74453660 17 0.04857 0 0.04857
chr17-16068506-T-C intronic None None rs201765279 59 0.16857 2 0.16857
chr17-16068545-A-C intronic None None rs77374546 27 0.07714 1 0.07714
chr17-16097825-T-G exonic nonsynonymous_SNV ['c.A59C', 'p.Y20S'] rs73281920 17 0.04857 0 0.04857
chr17-16097870-C-A exonic nonsynonymous_SNV ['c.G14T', 'p.G5V'] rs76145228 46 0.13143 0 0.13143
chr17-16097899-C-T UTR5 None None rs149293452 50 0.14286 0 0.14286
chr17-16097912-T-C UTR5 None None rs201806069 26 0.07429 0 0.07429
chr17-16097921-T-C UTR5 None None rs79572007 29 0.08286 0 0.08286
chr17-16097953-C-T UTR5 None None rs79346200 8 0.02286 0 0.02286
chr17-16098030-C-A intronic None None rs80257917 3 0.00857 0 0.00857
chr17-16098057-T-G intronic None None rs199955216 5 0.01429 0 0.01429
chr17-16098073-T-G intronic None None rs200958402 4 0.01143 0 0.01143
chr17-15968673-G-A intronic None None rs2285582 13 0.03714 5 0.03714
chr17-15976962-C-G intronic None None rs535573750 1 0.00286 0 0.00286
chr17-15977043-C-T intronic None None rs9896441 5 0.01429 1 0.01429
chr17-15984058-A-G intronic None None rs564545810 1 0.00286 0 0.00286
chr17-16021431-C-G intronic None None . 1 0.00286 0 0.00286
chr17-16029643-G-C intronic None None rs149482223 1 0.00286 0 0.00286
chr17-16089836-C-A intronic None None . 1 0.00286 0 0.00286
chr17-15947900-C-T intronic None None rs189094126 1 0.00286 0 0.00286
chr17-15950268-T-C exonic nonsynonymous_SNV ['c.A6367G', 'p.M2123V'] rs547933528 1 0.00286 0 0.00286
chr17-15961005-G-A exonic nonsynonymous_SNV ['c.C5906T', 'p.T1969I'] rs576951960 1 0.00286 0 0.00286
chr17-15965042-T-C exonic nonsynonymous_SNV ['c.A5554G', 'p.N1852D'] rs563704124 1 0.00286 0 0.00286
chr17-15968549-A-C intronic None None rs3815038 2 0.00571 1 0.00571
chr17-15971356-C-T exonic synonymous_SNV ['c.G4641A', 'p.A1547A'] rs771741474 1 0.00286 0 0.00286
chr17-15973774-T-G exonic nonsynonymous_SNV ['c.A4266C', 'p.L1422F'] rs61753150 1 0.00286 0 0.00286
chr17-15976558-T-G intronic None None rs9891379 1 0.00286 0 0.00286
chr17-15983373-C-T exonic nonsynonymous_SNV ['c.G3454A', 'p.A1152T'] rs200574326 1 0.00286 0 0.00286
chr17-15989525-C-T intronic None None rs573068760 1 0.00286 0 0.00286
chr17-15990445-G-A intronic None None rs73981445 3 0.00857 0 0.00857
chr17-16004368-C-T intronic None None rs7207889 1 0.00286 0 0.00286
chr17-16004984-G-A exonic nonsynonymous_SNV ['c.C1991T', 'p.T664M'] rs141130092 1 0.00286 0 0.00286
chr17-16011441-T-C intronic None None rs374948633 2 0.00571 1 0.00571
chr17-16011695-C-G intronic None None rs143529123 1 0.00286 0 0.00286
chr17-16049758-T-C exonic synonymous_SNV ['c.A687G', 'p.T229T'] . 1 0.00286 0 0.00286
chr17-16068278-A-G intronic None None rs200739355 10 0.02857 0 0.02857
chr17-16068287-A-T intronic None None rs201932638 11 0.03143 0 0.03143
chr17-16068464-G-A exonic synonymous_SNV ['c.C120T', 'p.F40F'] rs200311165 1 0.00286 0 0.00286
chr17-16068492-C-G intronic None None rs777127113 1 0.00286 0 0.00286
chr17-16068579-C-A intronic None None rs76571303 2 0.00571 0 0.00571
chr17-16068583-T-G intronic None None rs796602104 2 0.00571 0 0.00571
chr17-16068597-T-C intronic None None . 1 0.00286 0 0.00286
chr17-16068603-T-C intronic None None rs796642927 2 0.00571 0 0.00571
chr17-16097761-C-G intronic None None . 2 0.00571 0 0.00571
chr17-16097765-C-T intronic None None . 2 0.00571 0 0.00571
chr17-16097786-C-T exonic nonsynonymous_SNV ['c.G98A', 'p.R33H'] rs201037902 1 0.00286 0 0.00286
chr17-16097792-T-C exonic nonsynonymous_SNV ['c.A92G', 'p.N31S'] rs202117316 1 0.00286 0 0.00286
chr17-15934581-AGCT-A UTR3 None None . 1 0.00286 0 0.00286
chr17-15934586-AT-A UTR3 None None . 1 0.00286 0 0.00286
chr17-15973417-GT-G intronic None None rs368198526 1 0.00286 0 0.00286
chr17-15994864-T-TCTCA intronic None None rs3030848 2 0.00571 1 0.00571
chr17-16011493-CAA-CA intronic None None rs35417050 7 0.02000 0 0.02000
chr17-16022873-T-TA intronic None None . 1 0.00286 0 0.00286
chr17-16024701-C-CA intronic None None rs11410605 11 0.03143 3 0.03143
chr17-16097602-T-TAAG intronic None None rs113022990 5 0.01429 2 0.01429
chr17-16097736-AC-A intronic None None rs371039277 4 0.01143 0 0.01143
chr17-16097744-CAT-C intronic None None . 4 0.01143 0 0.01143
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AC-Allele Count; AF-Allele Frequency