Variant: chr17-15967338-C-A

INDEX-db frequencies

INDEX ALL INDEX Male INDEX Female INDEX Controls
Allele Count 11 8 3 11
Allele Number 350 202 148 350
Allele Frequency 0.03143 0.03960 0.02027 0.03143
Number of Homozygotes 1 1 0 1

Gene: NCOR1

Region: intronic

Annotation: None

Consequence: None

Average Genotype Quality in variant carriers: 52.20

Average Depth at the site in variant carriers: 25.00

dbSNP ID: rs73981433

ClinVar: chr17-15967338-C-A

UCSC Browser: chr17-15967338-C-A

Browse the variant in INDEX-db genome browser


In silico functional predictions

Score Prediction
SIFT None None
Polyphen2 HDIV None None
Polyphen2 HVAR None None
Mutation Taster None None
Mutation Assessor None None
LRT None None
FATHMM None None
CADD Phred None .
CADD Raw None .

Exome Aggregation Consortium frequencies

Allele Frequency
ExAC ALL 0.0415
ExAC SAS 0.0444
ExAC AFR 0.0901
ExAC AMR 0.0484
ExAC EAS 0.0701
ExAC FIN 0.0398
ExAC NFE 0.0284
ExAC OTH 0.0457
1000 Genomes 0.0650958