Variant: chr17-16068506-T-C

INDEX-db frequencies

INDEX ALL INDEX Male INDEX Female INDEX Controls
Allele Count 59 35 24 59
Allele Number 350 202 148 350
Allele Frequency 0.16857 0.17327 0.16216 0.16857
Number of Homozygotes 2 1 1 2

Gene: NCOR1

Region: intronic

Annotation: None

Consequence: None

Average Genotype Quality in variant carriers: 88.79

Average Depth at the site in variant carriers: 51.60

dbSNP ID: rs201765279

ClinVar: chr17-16068506-T-C

UCSC Browser: chr17-16068506-T-C

Browse the variant in INDEX-db genome browser


In silico functional predictions

Score Prediction
SIFT None None
Polyphen2 HDIV None None
Polyphen2 HVAR None None
Mutation Taster None None
Mutation Assessor None None
LRT None None
FATHMM None None
CADD Phred None .
CADD Raw None .

Exome Aggregation Consortium frequencies

Allele Frequency
ExAC ALL 0.4948
ExAC SAS 0.4929
ExAC AFR 0.4983
ExAC AMR 0.4956
ExAC EAS 0.4928
ExAC FIN 0.4936
ExAC NFE 0.4950
ExAC OTH 0.4931
1000 Genomes None