Variant: chr17-16068278-A-G

INDEX-db frequencies

INDEX ALL INDEX Male INDEX Female INDEX Controls
Allele Count 10 5 5 10
Allele Number 350 202 148 350
Allele Frequency 0.02857 0.02475 0.03378 0.02857
Number of Homozygotes 0 0 0 0

Gene: NCOR1

Region: intronic

Annotation: None

Consequence: None

Average Genotype Quality in variant carriers: 43.60

Average Depth at the site in variant carriers: 44.00

dbSNP ID: rs200739355

ClinVar: chr17-16068278-A-G

UCSC Browser: chr17-16068278-A-G

Browse the variant in INDEX-db genome browser


In silico functional predictions

Score Prediction
SIFT None None
Polyphen2 HDIV None None
Polyphen2 HVAR None None
Mutation Taster None None
Mutation Assessor None None
LRT None None
FATHMM None None
CADD Phred None .
CADD Raw None .

Exome Aggregation Consortium frequencies

Allele Frequency
ExAC ALL 0.0777
ExAC SAS 0.1802
ExAC AFR 0.1044
ExAC AMR 0.0605
ExAC EAS 0.0379
ExAC FIN 0.1027
ExAC NFE 0.0611
ExAC OTH 0.0895
1000 Genomes None