Variant: chr17-16068252-C-A

INDEX-db frequencies

INDEX ALL INDEX Male INDEX Female INDEX Controls
Allele Count 8 3 5 8
Allele Number 350 202 148 350
Allele Frequency 0.02286 0.01485 0.03378 0.02286
Number of Homozygotes 0 0 0 0

Gene: NCOR1

Region: intronic

Annotation: None

Consequence: None

Average Genotype Quality in variant carriers: 36.63

Average Depth at the site in variant carriers: 34.88

dbSNP ID: rs374864874

ClinVar: chr17-16068252-C-A

UCSC Browser: chr17-16068252-C-A

Browse the variant in INDEX-db genome browser


In silico functional predictions

Score Prediction
SIFT None None
Polyphen2 HDIV None None
Polyphen2 HVAR None None
Mutation Taster None None
Mutation Assessor None None
LRT None None
FATHMM None None
CADD Phred None .
CADD Raw None .

Exome Aggregation Consortium frequencies

Allele Frequency
ExAC ALL 0.0295
ExAC SAS 0.0694
ExAC AFR 0.0443
ExAC AMR 0.0239
ExAC EAS 0.0154
ExAC FIN 0.0344
ExAC NFE 0.0241
ExAC OTH 0.0384
1000 Genomes None