Variant: chr17-16097912-T-C

INDEX-db frequencies

INDEX ALL INDEX Male INDEX Female INDEX Controls
Allele Count 26 18 8 26
Allele Number 350 202 148 350
Allele Frequency 0.07429 0.08911 0.05405 0.07429
Number of Homozygotes 0 0 0 0

Gene: NCOR1

Region: UTR5

Annotation: None

Consequence: None

Average Genotype Quality in variant carriers: 55.23

Average Depth at the site in variant carriers: 55.92

dbSNP ID: rs201806069

ClinVar: chr17-16097912-T-C

UCSC Browser: chr17-16097912-T-C

Browse the variant in INDEX-db genome browser


In silico functional predictions

Score Prediction
SIFT None None
Polyphen2 HDIV None None
Polyphen2 HVAR None None
Mutation Taster None None
Mutation Assessor None None
LRT None None
FATHMM None None
CADD Phred None .
CADD Raw None .

Exome Aggregation Consortium frequencies

Allele Frequency
ExAC ALL 0.3500
ExAC SAS 0.4514
ExAC AFR 0.3321
ExAC AMR 0.3266
ExAC EAS 0.2467
ExAC FIN 0.3391
ExAC NFE 0.3240
ExAC OTH 0.3713
1000 Genomes None