Variant: chr20-31374991-G-A

INDEX-db frequencies

INDEX ALL INDEX Male INDEX Female INDEX Controls
Allele Count 119 69 50 119
Allele Number 350 202 148 350
Allele Frequency 0.34000 0.34158 0.33784 0.34000
Number of Homozygotes 37 21 16 37

Gene: DNMT3B

Region: intronic

Annotation: None

Consequence: None

Average Genotype Quality in variant carriers: 95.59

Average Depth at the site in variant carriers: 34.39

dbSNP ID: rs4911107

ClinVar: chr20-31374991-G-A

UCSC Browser: chr20-31374991-G-A

Browse the variant in INDEX-db genome browser


In silico functional predictions

Score Prediction
SIFT None None
Polyphen2 HDIV None None
Polyphen2 HVAR None None
Mutation Taster None None
Mutation Assessor None None
LRT None None
FATHMM None None
CADD Phred None .
CADD Raw None .

Exome Aggregation Consortium frequencies

Allele Frequency
ExAC ALL 0.5075
ExAC SAS 0.6375
ExAC AFR 0.5071
ExAC AMR 0.7056
ExAC EAS 0.9211
ExAC FIN 0.4020
ExAC NFE 0.3982
ExAC OTH 0.4465
1000 Genomes 0.617612