DNMT3B DNA methyltransferase 3 beta

Ensembl gene ID: ENSG00000088305

UCSC Browser: chr20:31350190-31397162

GeneCards: DNMT3B

gnomAD: DNMT3B

PharmGKB ID: PA27446


ARCHS4: DNMT3B

GTEx : DNMT3B

Number of variants: 64

Browse the gene in INDEX-db genome browser

Variants

Variant ID Region Annotation Consequence dbSNP AC in INDEX_ALL AF in INDEX_ALL No. of Homozygotes AF in INDEX_Controls
chr20-31350238-C-T UTR5 None None rs139762513 2 0.00571 0 0.00571
chr20-31367948-C-T exonic synonymous_SNV ['c.C27T', 'p.S9S'] rs6058885 26 0.07429 3 0.07429
chr20-31368025-G-A intronic None None . 1 0.00286 0 0.00286
chr20-31368052-A-C intronic None None rs562098022 1 0.00286 0 0.00286
chr20-31368195-C-T exonic synonymous_SNV ['c.C66T', 'p.L22L'] rs143743194 2 0.00571 0 0.00571
chr20-31368225-C-T exonic synonymous_SNV ['c.C96T', 'p.S32S'] rs768199189 1 0.00286 0 0.00286
chr20-31368298-G-C intronic None None rs568228701 1 0.00286 0 0.00286
chr20-31368350-G-A intronic None None rs181671547 1 0.00286 0 0.00286
chr20-31368957-T-C intronic None None rs6058886 2 0.00571 1 0.00571
chr20-31368960-C-A intronic None None rs6141814 9 0.02571 4 0.02571
chr20-31369233-C-T intronic None None rs560602182 2 0.00571 0 0.00571
chr20-31369479-G-A intronic None None rs4911258 17 0.04857 6 0.04857
chr20-31374259-C-T intronic None None rs2424913 131 0.37429 40 0.37429
chr20-31374337-C-T exonic synonymous_SNV ['c.C336T', 'p.S112S'] rs199763590 2 0.00571 0 0.00571
chr20-31374520-A-G intronic None None rs2424914 198 0.56571 75 0.56571
chr20-31374913-C-G intronic None None rs376708272 2 0.00571 1 0.00571
chr20-31374991-G-A intronic None None rs4911107 119 0.34000 37 0.34000
chr20-31375311-A-G intronic None None rs4911108 128 0.36571 51 0.36571
chr20-31376490-T-C intronic None None rs4911260 37 0.10571 12 0.10571
chr20-31379184-C-A intronic None None rs2889703 36 0.10286 15 0.10286
chr20-31379329-C-T intronic None None rs546831719 2 0.00571 0 0.00571
chr20-31379665-C-T intronic None None rs910084 44 0.12571 22 0.12571
chr20-31380309-G-A intronic None None rs1474738 53 0.15143 16 0.15143
chr20-31380526-G-A exonic nonsynonymous_SNV ['c.G788A', 'p.G263D'] rs754921958 1 0.00286 0 0.00286
chr20-31381229-G-A intronic None None rs993419 70 0.20000 28 0.20000
chr20-31381507-T-G intronic None None rs73112162 1 0.00286 0 0.00286
chr20-31383299-A-G exonic nonsynonymous_SNV ['c.A923G', 'p.Y308C'] rs143462810 29 0.08286 1 0.08286
chr20-31383353-T-G intronic None None rs910085 217 0.62000 74 0.62000
chr20-31383530-C-T intronic None None rs875041 155 0.44286 64 0.44286
chr20-31384801-C-T intronic None None rs6058890 13 0.03714 1 0.03714
chr20-31384880-C-A intronic None None rs6057648 12 0.03429 1 0.03429
chr20-31385269-G-T intronic None None rs992472 14 0.04000 5 0.04000
chr20-31385814-C-T intronic None None rs2424921 2 0.00571 1 0.00571
chr20-31386347-T-C exonic synonymous_SNV ['c.T1284C', 'p.C428C'] rs6058891 254 0.72571 98 0.72571
chr20-31386449-T-C exonic synonymous_SNV ['c.T1386C', 'p.Y462Y'] rs2424922 214 0.61143 86 0.61143
chr20-31387849-T-C intronic None None rs660291 3 0.00857 0 0.00857
chr20-31387954-C-G intronic None None rs1997797 163 0.46571 59 0.46571
chr20-31388461-C-T intronic None None rs6058892 33 0.09429 16 0.09429
chr20-31388537-A-T intronic None None rs77179792 2 0.00571 0 0.00571
chr20-31388636-T-C intronic None None rs2424928 214 0.61143 78 0.61143
chr20-31389009-C-T intronic None None rs2065576 129 0.36857 45 0.36857
chr20-31389142-G-A exonic synonymous_SNV ['c.G1767A', 'p.K589K'] rs144497819 3 0.00857 0 0.00857
chr20-31390533-T-C intronic None None rs2064350 7 0.02000 3 0.02000
chr20-31393352-G-A intronic None None rs4911262 51 0.14571 24 0.14571
chr20-31395477-G-A intronic None None rs6119286 10 0.02857 0 0.02857
chr20-31396152-C-T UTR3 None None rs6058896 3 0.00857 1 0.00857
chr20-31396472-A-G UTR3 None None rs535281176 1 0.00286 0 0.00286
chr20-31396536-A-G UTR3 None None rs2424932 72 0.20571 33 0.20571
chr20-31396566-G-A UTR3 None None . 1 0.00286 0 0.00286
chr20-31397059-G-C UTR3 None None rs563126581 2 0.00571 1 0.00571
chr20-31350244-C-T UTR5 None None . 1 0.00286 0 0.00286
chr20-31384635-T-C exonic nonsynonymous_SNV ['c.T1049C', 'p.F350S'] rs150736372 1 0.00286 0 0.00286
chr20-31384894-T-C intronic None None rs566466566 2 0.00571 0 0.00571
chr20-31389008-G-C intronic None None rs553511280 1 0.00286 0 0.00286
chr20-31369126-C-G intronic None None rs190353959 1 0.00286 0 0.00286
chr20-31369280-G-A intronic None None rs548919805 1 0.00286 0 0.00286
chr20-31375386-A-G intronic None None rs6057645 2 0.00571 1 0.00571
chr20-31376995-C-T intronic None None rs6119285 1 0.00286 0 0.00286
chr20-31380201-A-T intronic None None rs1040555 13 0.03714 5 0.03714
chr20-31380383-G-A intronic None None rs368420286 1 0.00286 0 0.00286
chr20-31380588-T-C intronic None None rs568923866 1 0.00286 0 0.00286
chr20-31389202-C-T exonic synonymous_SNV ['c.C1827T', 'p.G609G'] rs759599570 1 0.00286 0 0.00286
chr20-31393803-T-C intronic None None rs4911263 11 0.03143 4 0.03143
chr20-31394251-C-T intronic None None rs530070615 1 0.00286 0 0.00286
chr20-31369136-AC-A intronic None None rs3835238 133 0.38000 38 0.38000
chr20-31372542-T-TTCATCA intronic None None rs372922110 22 0.06286 1 0.06286
chr20-31384830-CAG-C intronic None None rs747007197 1 0.00286 0 0.00286
chr20-31395997-CT-C UTR3 None None . 1 0.00286 0 0.00286
chr20-31397019-AT-A UTR3 None None rs398088406 99 0.28286 40 0.28286
chr20-31397258-GATTC-G downstream None None rs138092501 2 0.00571 0 0.00571
chr20-31387737-CTAGT-C intronic None None rs11468163 4 0.01143 2 0.01143
Export variants to CSV

AC-Allele Count; AF-Allele Frequency