Variant: chr20-31383353-T-G

INDEX-db frequencies

INDEX ALL INDEX Male INDEX Female INDEX Controls
Allele Count 217 126 91 217
Allele Number 350 202 148 350
Allele Frequency 0.62000 0.62376 0.61486 0.62000
Number of Homozygotes 74 41 33 74

Gene: DNMT3B

Region: intronic

Annotation: None

Consequence: None

Average Genotype Quality in variant carriers: 145.20

Average Depth at the site in variant carriers: 55.35

dbSNP ID: rs910085

ClinVar: chr20-31383353-T-G

UCSC Browser: chr20-31383353-T-G

Browse the variant in INDEX-db genome browser


In silico functional predictions

Score Prediction
SIFT None None
Polyphen2 HDIV None None
Polyphen2 HVAR None None
Mutation Taster None None
Mutation Assessor None None
LRT None None
FATHMM None None
CADD Phred None .
CADD Raw None .

Exome Aggregation Consortium frequencies

Allele Frequency
ExAC ALL 0.4836
ExAC SAS 0.5955
ExAC AFR 0.4570
ExAC AMR 0.6981
ExAC EAS 0.9210
ExAC FIN 0.3833
ExAC NFE 0.3768
ExAC OTH 0.4262
1000 Genomes 0.584864